Plot barcode ranks

plotBarcodeRanks(object, ...)

# S4 method for SingleCellExperiment
plotBarcodeRanks(object,
  colors = c(fitline = acidplots::lightPalette[["blue"]], inflection =
  acidplots::lightPalette[["purple"]], knee =
  acidplots::lightPalette[["orange"]]), ...)

Arguments

object

Object.

colors

character(3). Character vector denoting fitline, inflection, and knee point colors. Must pass in color names or hexadecimal values.

...

Passthrough to barcodeRanksPerSample().

Value

ggplot grid.

Note

Requires DropletUtils package to be installed.

Updated 2019-09-15.

Examples

data(SingleCellExperiment, package = "acidtest") ## SingleCellExperiment ==== if (requireNamespace("DropletUtils", quietly = TRUE)) { object <- SingleCellExperiment plotBarcodeRanks(object) }